Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AC004987.2-201ENST00000395959 1148 ntBASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AL109954.1-202ENST00000564051 2148 ntBASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AC005829.1-201ENST00000570002 483 ntBASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AC105339.1-204ENST00000636249 355 ntBASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AC084121.4-201ENST00000641598 221 ntBASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 AF228730.8-201ENST00000642140 221 ntBASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF11Q9Y3C5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF11Q9Y3C5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 AC005089.1-201ENST00000619486 2241 ntBASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF11Q9Y3C5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms