Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 UBALD1-205ENST00000590891 2641 ntBASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 GAPDHP40-201ENST00000505218 1006 ntBASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 AL161670.2-201ENST00000557650 1227 ntBASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 AP000346.4-201ENST00000614827 381 ntBASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 AC092068.3-201ENST00000587894 2016 ntBASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 AL645728.1-201ENST00000366221 2101 ntBASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 AL596276.2-201ENST00000447525 331 ntBASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 NUP210P1-202ENST00000504322 710 ntBASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 AL133499.1-201ENST00000596207 608 ntBASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZC3H4Q9UPT8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 MIR3147-201ENST00000577811 66 ntBASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 ECM1P1-201ENST00000604092 1279 ntBASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZC3H4Q9UPT8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.93■□□□□ 0.62
ZC3H4Q9UPT8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZC3H4Q9UPT8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZC3H4Q9UPT8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZC3H4Q9UPT8 AC008132.1-202ENST00000342005 1389 ntBASIC18.93■□□□□ 0.62
ZC3H4Q9UPT8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZC3H4Q9UPT8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZC3H4Q9UPT8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms