Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 AC092580.3-201ENST00000430932 139 ntBASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 TARDBPP1-201ENST00000442013 1203 ntBASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 AL512361.1-201ENST00000554200 418 ntBASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 AL158211.3-201ENST00000607385 239 ntBASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 AC092384.3-202ENST00000564646 2873 ntBASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 AC087481.3-201ENST00000602886 1894 ntBASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP4E1Q9UPM8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 MIR943-201ENST00000401286 94 ntBASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 AC073347.1-201ENST00000421633 2643 ntBASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4E1Q9UPM8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 PPT1-215ENST00000641471 2368 ntBASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 AC092183.1-201ENST00000469884 875 ntBASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 RN7SL618P-201ENST00000477850 296 ntBASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 AC097493.3-201ENST00000509725 367 ntBASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4E1Q9UPM8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms