Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
USP25Q9UHP3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
USP25Q9UHP3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.21■□□□□ 0.51
USP25Q9UHP3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.21■□□□□ 0.51
USP25Q9UHP3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP25Q9UHP3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AC105250.1-201ENST00000509378 2057 ntBASIC18.2■□□□□ 0.5
USP25Q9UHP3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AC099522.2-201ENST00000607001 744 ntBASIC18.2■□□□□ 0.5
USP25Q9UHP3 AC027601.4-201ENST00000611259 610 ntBASIC18.2■□□□□ 0.5
USP25Q9UHP3 FAM197Y3-203ENST00000618346 717 ntBASIC18.2■□□□□ 0.5
USP25Q9UHP3 AL513190.1-201ENST00000621254 727 ntBASIC18.2■□□□□ 0.5
USP25Q9UHP3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AC112693.3-201ENST00000624819 1983 ntBASIC18.2■□□□□ 0.5
USP25Q9UHP3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP25Q9UHP3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.2■□□□□ 0.5
USP25Q9UHP3 AC092127.1-201ENST00000567093 3455 ntBASIC18.19■□□□□ 0.5
USP25Q9UHP3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 AC105233.2-201ENST00000523697 349 ntBASIC18.19■□□□□ 0.5
USP25Q9UHP3 AF228730.5-201ENST00000530288 346 ntBASIC18.19■□□□□ 0.5
USP25Q9UHP3 AC106730.1-201ENST00000566722 1090 ntBASIC18.19■□□□□ 0.5
USP25Q9UHP3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 AC024267.1-201ENST00000582320 895 ntBASIC18.19■□□□□ 0.5
USP25Q9UHP3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP25Q9UHP3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.19■□□□□ 0.5
USP25Q9UHP3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 C18orf15-201ENST00000623680 2534 ntBASIC18.18■□□□□ 0.5
USP25Q9UHP3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.18■□□□□ 0.5
USP25Q9UHP3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.18■□□□□ 0.5
USP25Q9UHP3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP25Q9UHP3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms