Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
GTF2IRD1Q9UHL9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 AC099548.2-209ENST00000480264 625 ntBASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GTF2IRD1Q9UHL9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 AC006001.1-201ENST00000325130 474 ntBASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 KRT18P25-201ENST00000508931 1278 ntBASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 AC023310.1-201ENST00000554836 735 ntBASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 MIR4313-201ENST00000580760 101 ntBASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 AC103810.3-201ENST00000583567 96 ntBASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 CYP2T1P-202ENST00000641596 2535 ntBASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.24■□□□□ 0.35
GTF2IRD1Q9UHL9 MTHFR-217ENST00000641820 1569 ntBASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 AL138799.1-201ENST00000448213 1675 ntBASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 BCYRN1-201ENST00000418539 200 ntBASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 FAM197Y7-201ENST00000432892 766 ntBASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms