Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00474Q9P2X8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LINC00474Q9P2X8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00474Q9P2X8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00474Q9P2X8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC00474Q9P2X8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00474Q9P2X8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LINC00474Q9P2X8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 MIR346-201ENST00000362234 95 ntBASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 CNN2P11-201ENST00000429351 262 ntBASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SPCS2P4-201ENST00000436160 681 ntBASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 RNA5SP410-201ENST00000516285 106 ntBASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 AP000842.3-202ENST00000569238 1080 ntBASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 MIR4321-201ENST00000592276 80 ntBASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 AC023511.2-201ENST00000618803 211 ntBASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00474Q9P2X8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 CYP2T1P-202ENST00000641596 2535 ntBASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00474Q9P2X8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms