Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 PFN1P12-201ENST00000455938 534 ntBASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 AC145423.3-201ENST00000615987 467 ntBASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.28■□□□□ 0.2
HCFC1R1Q9NWW0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 AC078819.1-201ENST00000547454 765 ntBASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 AC012085.1-201ENST00000548270 765 ntBASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 DUX4L45-201ENST00000566406 1057 ntBASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 MIR3615-201ENST00000581999 87 ntBASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 AC091271.1-201ENST00000611877 1162 ntBASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1R1Q9NWW0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 AL138799.1-201ENST00000448213 1675 ntBASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1R1Q9NWW0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1R1Q9NWW0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms