Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 EGFEM1P-202ENST00000431685 1563 ntBASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 AC073335.2-201ENST00000610177 3441 ntBASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDC42SE1Q9NRR8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 RCC2P3-201ENST00000418112 1537 ntBASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 DDX12P-201ENST00000432996 2947 ntBASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDC42SE1Q9NRR8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms