Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 SPDYE17-201ENST00000412399 783 ntBASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 HNRNPUP1-201ENST00000554987 333 ntBASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 AP001059.3-201ENST00000619053 235 ntBASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC40Q9H9A6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 AC006058.4-201ENST00000624016 1670 ntBASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 AZGP1P1-201ENST00000411909 902 ntBASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 SPDYE7P-202ENST00000420373 878 ntBASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 CNN2P11-201ENST00000429351 262 ntBASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 RN7SL828P-201ENST00000607615 303 ntBASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 MIR6080-201ENST00000617359 66 ntBASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC40Q9H9A6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 AC127383.1-201ENST00000444697 1800 ntBASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC40Q9H9A6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 FO393414.2-201ENST00000405153 598 ntBASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AC136604.1-201ENST00000418535 575 ntBASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AL109954.1-202ENST00000564051 2148 ntBASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AC097359.3-201ENST00000603982 1210 ntBASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AC006486.2-201ENST00000624246 2199 ntBASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms