Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 CHMP4BP1-201ENST00000556017 588 ntBASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 MIR3619-201ENST00000579667 83 ntBASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2OQ9C0C9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 KRT8P37-201ENST00000451609 1420 ntBASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 AL645728.1-201ENST00000366221 2101 ntBASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 CNN2P8-201ENST00000421872 913 ntBASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 IMP3P2-201ENST00000489760 475 ntBASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 EEF1DP1-201ENST00000585891 896 ntBASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBE2OQ9C0C9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UBE2OQ9C0C9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.39■□□□□ 0.38
UBE2OQ9C0C9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 RPL17P11-201ENST00000417593 544 ntBASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 MTX1P1-201ENST00000440904 838 ntBASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms