Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.82■□□□□ 0.44
MTRQ99707 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.82■□□□□ 0.44
MTRQ99707 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.82■□□□□ 0.44
MTRQ99707 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 MRPS18AP1-201ENST00000414458 589 ntBASIC17.82■□□□□ 0.44
MTRQ99707 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.82■□□□□ 0.44
MTRQ99707 HIST3H2BA-201ENST00000436555 524 ntBASIC17.82■□□□□ 0.44
MTRQ99707 AC009477.1-201ENST00000452936 217 ntBASIC17.82■□□□□ 0.44
MTRQ99707 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.82■□□□□ 0.44
MTRQ99707 AL512361.1-201ENST00000554200 418 ntBASIC17.82■□□□□ 0.44
MTRQ99707 HNRNPUP1-201ENST00000554987 333 ntBASIC17.82■□□□□ 0.44
MTRQ99707 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.82■□□□□ 0.44
MTRQ99707 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.82■□□□□ 0.44
MTRQ99707 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.82■□□□□ 0.44
MTRQ99707 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MTRQ99707 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.82■□□□□ 0.44
MTRQ99707 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.82■□□□□ 0.44
MTRQ99707 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MTRQ99707 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.82■□□□□ 0.44
MTRQ99707 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTRQ99707 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
MTRQ99707 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.81■□□□□ 0.44
MTRQ99707 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.81■□□□□ 0.44
MTRQ99707 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.81■□□□□ 0.44
MTRQ99707 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.81■□□□□ 0.44
MTRQ99707 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.81■□□□□ 0.44
MTRQ99707 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
MTRQ99707 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 AZGP1P1-201ENST00000411909 902 ntBASIC17.81■□□□□ 0.44
MTRQ99707 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.81■□□□□ 0.44
MTRQ99707 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.81■□□□□ 0.44
MTRQ99707 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MTRQ99707 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.81■□□□□ 0.44
MTRQ99707 AC010336.2-201ENST00000564226 506 ntBASIC17.81■□□□□ 0.44
MTRQ99707 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MTRQ99707 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MTRQ99707 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
MTRQ99707 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MTRQ99707 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTRQ99707 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MTRQ99707 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MTRQ99707 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MTRQ99707 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.8■□□□□ 0.44
MTRQ99707 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MTRQ99707 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.8■□□□□ 0.44
MTRQ99707 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.8■□□□□ 0.44
MTRQ99707 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.8■□□□□ 0.44
MTRQ99707 PHKG1P2-201ENST00000457537 863 ntBASIC17.8■□□□□ 0.44
MTRQ99707 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.8■□□□□ 0.44
MTRQ99707 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.8■□□□□ 0.44
MTRQ99707 AL033527.5-202ENST00000641632 1098 ntBASIC17.8■□□□□ 0.44
MTRQ99707 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.8■□□□□ 0.44
MTRQ99707 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTRQ99707 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms