Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PHOX2BQ99453 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHOX2BQ99453 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PHOX2BQ99453 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 BAATP1-201ENST00000412284 1225 ntBASIC16.04■□□□□ 0.16
PHOX2BQ99453 CYP46A4P-201ENST00000414953 267 ntBASIC16.04■□□□□ 0.16
PHOX2BQ99453 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 PRKXP1-201ENST00000561423 1122 ntBASIC16.04■□□□□ 0.16
PHOX2BQ99453 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 MIR3907-201ENST00000579424 151 ntBASIC16.04■□□□□ 0.16
PHOX2BQ99453 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 AC103702.1-201ENST00000548801 2630 ntBASIC16.04■□□□□ 0.16
PHOX2BQ99453 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHOX2BQ99453 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 FLJ38576-201ENST00000623820 2459 ntBASIC16.04■□□□□ 0.16
PHOX2BQ99453 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PHOX2BQ99453 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 MAGEA5-201ENST00000446757 942 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 FGFR3P5-201ENST00000564496 886 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 NDUFV2P1-201ENST00000596415 907 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 AC079336.7-201ENST00000623428 1078 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 LINC01451-201ENST00000623792 534 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 CU633904.3-201ENST00000624042 1029 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 AL138688.1-201ENST00000624851 1594 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 AC018735.1-201ENST00000437208 1502 ntBASIC16.03■□□□□ 0.16
PHOX2BQ99453 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.03■□□□□ 0.16
PHOX2BQ99453 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHOX2BQ99453 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PHOX2BQ99453 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PHOX2BQ99453 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PHOX2BQ99453 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.02■□□□□ 0.16
PHOX2BQ99453 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
PHOX2BQ99453 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PHOX2BQ99453 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms