Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC239868.1-201ENST00000369385 493 ntBASIC25.46■■□□□ 1.67
IFT140Q96RY7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
IFT140Q96RY7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 CASP16P-204ENST00000635032 809 ntBASIC25.46■■□□□ 1.67
IFT140Q96RY7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
IFT140Q96RY7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC25.46■■□□□ 1.67
IFT140Q96RY7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
IFT140Q96RY7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 AP000356.3-201ENST00000382243 753 ntBASIC25.45■■□□□ 1.66
IFT140Q96RY7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 AC012362.1-201ENST00000434906 739 ntBASIC25.45■■□□□ 1.66
IFT140Q96RY7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 TMCO5B-205ENST00000530020 894 ntBASIC25.45■■□□□ 1.66
IFT140Q96RY7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 AC026803.1-201ENST00000569130 274 ntBASIC25.45■■□□□ 1.66
IFT140Q96RY7 AC002472.3-201ENST00000640124 621 ntBASIC25.45■■□□□ 1.66
IFT140Q96RY7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 E2F3P2-201ENST00000447755 1422 ntBASIC25.45■■□□□ 1.66
IFT140Q96RY7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
IFT140Q96RY7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
IFT140Q96RY7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
IFT140Q96RY7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
IFT140Q96RY7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
IFT140Q96RY7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 ME2P1-201ENST00000426028 1970 ntBASIC25.44■■□□□ 1.66
IFT140Q96RY7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
IFT140Q96RY7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 SAMD11P1-201ENST00000571429 661 ntBASIC25.44■■□□□ 1.66
IFT140Q96RY7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
IFT140Q96RY7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
IFT140Q96RY7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
IFT140Q96RY7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
IFT140Q96RY7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 FAM90A2P-201ENST00000511144 1395 ntBASIC25.43■■□□□ 1.66
IFT140Q96RY7 FAM90A25P-201ENST00000528404 1395 ntBASIC25.43■■□□□ 1.66
IFT140Q96RY7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
IFT140Q96RY7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 POU5F1P2-201ENST00000521750 823 ntBASIC25.43■■□□□ 1.66
IFT140Q96RY7 DUX4L46-201ENST00000566845 751 ntBASIC25.43■■□□□ 1.66
IFT140Q96RY7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 AL109837.1-201ENST00000603272 613 ntBASIC25.43■■□□□ 1.66
IFT140Q96RY7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC25.43■■□□□ 1.66
IFT140Q96RY7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
IFT140Q96RY7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 HLA-K-203ENST00000430151 1046 ntBASIC25.42■■□□□ 1.66
IFT140Q96RY7 AC078875.1-201ENST00000431907 724 ntBASIC25.42■■□□□ 1.66
IFT140Q96RY7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC25.42■■□□□ 1.66
IFT140Q96RY7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
IFT140Q96RY7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms