Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.14□□□□□ -0.31
GAFA1Q96PS6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 AC135586.1-201ENST00000539323 574 ntBASIC13.14□□□□□ -0.31
GAFA1Q96PS6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AL139384.1-201ENST00000612143 3047 ntBASIC13.13□□□□□ -0.31
GAFA1Q96PS6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AC015922.1-201ENST00000421102 1152 ntBASIC13.13□□□□□ -0.31
GAFA1Q96PS6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 FAM8A3P-201ENST00000427218 844 ntBASIC13.13□□□□□ -0.31
GAFA1Q96PS6 UGT1A2P-201ENST00000454886 866 ntBASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 SPDYE18-201ENST00000510091 1050 ntBASIC13.13□□□□□ -0.31
GAFA1Q96PS6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.13□□□□□ -0.31
GAFA1Q96PS6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms