Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM47Q96LD4 GGT3P-204ENST00000453783 1664 ntBASIC18.5■□□□□ 0.55
TRIM47Q96LD4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 AC108725.1-201ENST00000495472 409 ntBASIC18.5■□□□□ 0.55
TRIM47Q96LD4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM47Q96LD4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 HIST3H2BA-201ENST00000436555 524 ntBASIC18.49■□□□□ 0.55
TRIM47Q96LD4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 MIR5189-201ENST00000577370 114 ntBASIC18.49■□□□□ 0.55
TRIM47Q96LD4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 AL512652.2-201ENST00000625156 1716 ntBASIC18.49■□□□□ 0.55
TRIM47Q96LD4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM47Q96LD4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 RN7SL399P-201ENST00000471648 279 ntBASIC18.48■□□□□ 0.55
TRIM47Q96LD4 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.48■□□□□ 0.55
TRIM47Q96LD4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM47Q96LD4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms