Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AC134915.1-201ENST00000426461 574 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AC234783.1-201ENST00000441761 496 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AC097359.3-201ENST00000603982 1210 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 CU634019.7-201ENST00000624153 1185 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 FP236241.2-201ENST00000624906 1185 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AC006449.5-201ENST00000610658 2098 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 CICP6-201ENST00000457191 2729 ntBASIC17.12■□□□□ 0.33
PGBD4Q96DM1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PGBD4Q96DM1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 DOC2GP-204ENST00000639052 2548 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 TMEM14DP-201ENST00000422205 345 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 AC007274.1-201ENST00000439805 662 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 ENPP7P5-201ENST00000541031 1031 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 AC008735.3-201ENST00000596646 500 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 AC092364.2-201ENST00000596710 2692 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 AL607033.1-201ENST00000623900 1599 ntBASIC17.11■□□□□ 0.33
PGBD4Q96DM1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.11■□□□□ 0.33
PGBD4Q96DM1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.1■□□□□ 0.33
PGBD4Q96DM1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms