Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 U82695.1-201ENST00000635752 1889 ntBASIC11.83□□□□□ -0.52
RNF183Q96D59 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.83□□□□□ -0.52
RNF183Q96D59 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.83□□□□□ -0.52
RNF183Q96D59 FAM207CP-201ENST00000443486 507 ntBASIC11.83□□□□□ -0.52
RNF183Q96D59 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.83□□□□□ -0.52
RNF183Q96D59 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.83□□□□□ -0.52
RNF183Q96D59 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.83□□□□□ -0.52
RNF183Q96D59 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.83□□□□□ -0.52
RNF183Q96D59 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.83□□□□□ -0.52
RNF183Q96D59 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
RNF183Q96D59 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 AC005622.1-201ENST00000636801 1703 ntBASIC11.83□□□□□ -0.52
RNF183Q96D59 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF183Q96D59 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RNF183Q96D59 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF183Q96D59 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 FAM45BP-202ENST00000592932 1624 ntBASIC11.82□□□□□ -0.52
RNF183Q96D59 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RNF183Q96D59 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 SNX18-202ENST00000343017 3140 ntBASIC11.82□□□□□ -0.52
RNF183Q96D59 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
RNF183Q96D59 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RNF183Q96D59 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RNF183Q96D59 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
RNF183Q96D59 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
RNF183Q96D59 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF183Q96D59 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.82□□□□□ -0.52
RNF183Q96D59 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF183Q96D59 AC004890.2-204ENST00000481968 304 ntBASIC11.82□□□□□ -0.52
RNF183Q96D59 TERF1P3-201ENST00000505638 1227 ntBASIC11.82□□□□□ -0.52
RNF183Q96D59 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF183Q96D59 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF183Q96D59 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF183Q96D59 AC061975.2-201ENST00000581722 295 ntBASIC11.82□□□□□ -0.52
RNF183Q96D59 AC138761.1-201ENST00000584393 385 ntBASIC11.82□□□□□ -0.52
RNF183Q96D59 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF183Q96D59 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF183Q96D59 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms