Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIFAQ96CG3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIFAQ96CG3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 AC245100.5-201ENST00000452108 331 ntBASIC16.77■□□□□ 0.28
TIFAQ96CG3 AC104784.1-201ENST00000473096 294 ntBASIC16.77■□□□□ 0.28
TIFAQ96CG3 SERPINA13P-202ENST00000478994 924 ntBASIC16.77■□□□□ 0.28
TIFAQ96CG3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 ECM1P1-201ENST00000604092 1279 ntBASIC16.77■□□□□ 0.28
TIFAQ96CG3 AC018635.2-201ENST00000608625 364 ntBASIC16.77■□□□□ 0.28
TIFAQ96CG3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIFAQ96CG3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TIFAQ96CG3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TIFAQ96CG3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.77■□□□□ 0.28
TIFAQ96CG3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
TIFAQ96CG3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.77■□□□□ 0.27
TIFAQ96CG3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.77■□□□□ 0.27
TIFAQ96CG3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
TIFAQ96CG3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.77■□□□□ 0.27
TIFAQ96CG3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TIFAQ96CG3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TIFAQ96CG3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 AC079178.1-201ENST00000420915 656 ntBASIC16.76■□□□□ 0.27
TIFAQ96CG3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 AL133499.1-201ENST00000596207 608 ntBASIC16.76■□□□□ 0.27
TIFAQ96CG3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.76■□□□□ 0.27
TIFAQ96CG3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIFAQ96CG3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.75■□□□□ 0.27
TIFAQ96CG3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.75■□□□□ 0.27
TIFAQ96CG3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 MIR3147-201ENST00000577811 66 ntBASIC16.75■□□□□ 0.27
TIFAQ96CG3 RN7SL555P-201ENST00000584742 339 ntBASIC16.75■□□□□ 0.27
TIFAQ96CG3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.75■□□□□ 0.27
TIFAQ96CG3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIFAQ96CG3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms