Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 FAM215A-202ENST00000632077 792 ntBASIC14.11□□□□□ -0.15
RFT1Q96AA3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.11□□□□□ -0.15
RFT1Q96AA3 AC007686.3-201ENST00000619017 3487 ntBASIC14.11□□□□□ -0.15
RFT1Q96AA3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RFT1Q96AA3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.11□□□□□ -0.15
RFT1Q96AA3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 RPS2P28-201ENST00000314255 741 ntBASIC14.1□□□□□ -0.15
RFT1Q96AA3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 AL513480.1-201ENST00000451731 511 ntBASIC14.1□□□□□ -0.15
RFT1Q96AA3 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.1□□□□□ -0.15
RFT1Q96AA3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 AL049840.3-201ENST00000602669 611 ntBASIC14.1□□□□□ -0.15
RFT1Q96AA3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
RFT1Q96AA3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RFT1Q96AA3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.09□□□□□ -0.15
RFT1Q96AA3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms