Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.46■□□□□ 0.07
NCLNQ969V3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NCLNQ969V3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NCLNQ969V3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.46■□□□□ 0.07
NCLNQ969V3 AC004461.1-201ENST00000412461 403 ntBASIC15.46■□□□□ 0.07
NCLNQ969V3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
NCLNQ969V3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.46■□□□□ 0.07
NCLNQ969V3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.46■□□□□ 0.07
NCLNQ969V3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NCLNQ969V3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.46■□□□□ 0.07
NCLNQ969V3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
NCLNQ969V3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.46■□□□□ 0.07
NCLNQ969V3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.46■□□□□ 0.07
NCLNQ969V3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.46■□□□□ 0.07
NCLNQ969V3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.46■□□□□ 0.07
NCLNQ969V3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCLNQ969V3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.46■□□□□ 0.06
NCLNQ969V3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.46■□□□□ 0.06
NCLNQ969V3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
NCLNQ969V3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
NCLNQ969V3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NCLNQ969V3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.45■□□□□ 0.06
NCLNQ969V3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.45■□□□□ 0.06
NCLNQ969V3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.45■□□□□ 0.06
NCLNQ969V3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 AL136379.1-201ENST00000623471 2642 ntBASIC15.45■□□□□ 0.06
NCLNQ969V3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.45■□□□□ 0.06
NCLNQ969V3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.45■□□□□ 0.06
NCLNQ969V3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.45■□□□□ 0.06
NCLNQ969V3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.45■□□□□ 0.06
NCLNQ969V3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.45■□□□□ 0.06
NCLNQ969V3 AC079140.1-201ENST00000508039 487 ntBASIC15.45■□□□□ 0.06
NCLNQ969V3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.45■□□□□ 0.06
NCLNQ969V3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NCLNQ969V3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 AC243562.1-201ENST00000560672 389 ntBASIC15.45■□□□□ 0.06
NCLNQ969V3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 AC004835.2-201ENST00000603762 682 ntBASIC15.45■□□□□ 0.06
NCLNQ969V3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.45■□□□□ 0.06
NCLNQ969V3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCLNQ969V3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.44■□□□□ 0.06
NCLNQ969V3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.44■□□□□ 0.06
NCLNQ969V3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NCLNQ969V3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCLNQ969V3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCLNQ969V3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCLNQ969V3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCLNQ969V3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCLNQ969V3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.44■□□□□ 0.06
NCLNQ969V3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCLNQ969V3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NCLNQ969V3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCLNQ969V3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NCLNQ969V3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.44■□□□□ 0.06
NCLNQ969V3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.44■□□□□ 0.06
NCLNQ969V3 AC005622.1-201ENST00000636801 1703 ntBASIC15.44■□□□□ 0.06
NCLNQ969V3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms