Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 MIR4313-201ENST00000580760 101 ntBASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.55■□□□□ 0.88
RAPGEF4Q8WZA2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 AL022328.3-201ENST00000607943 679 ntBASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAPGEF4Q8WZA2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAPGEF4Q8WZA2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 RNA5SP486-201ENST00000515961 83 ntBASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 MIR4741-201ENST00000579822 90 ntBASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPGEF4Q8WZA2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RAPGEF4Q8WZA2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAPGEF4Q8WZA2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
RAPGEF4Q8WZA2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms