Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
MBD3L1Q8WWY6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AC079781.5-202ENST00000641784 3743 ntBASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 KRT17P6-201ENST00000453795 1220 ntBASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AC092647.4-201ENST00000457211 535 ntBASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 AP005117.1-201ENST00000584346 1413 ntBASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.45□□□□□ -0.42
MBD3L1Q8WWY6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.44□□□□□ -0.42
MBD3L1Q8WWY6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms