Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.77□□□□□ -0.21
BEST4Q8NFU0 MTDHP3-201ENST00000594186 672 ntBASIC13.77□□□□□ -0.21
BEST4Q8NFU0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 AC129492.6-201ENST00000611383 1305 ntBASIC13.77□□□□□ -0.21
BEST4Q8NFU0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BEST4Q8NFU0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AC105250.1-201ENST00000509378 2057 ntBASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AC092127.1-201ENST00000567093 3455 ntBASIC13.76□□□□□ -0.21
BEST4Q8NFU0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 AL049597.2-201ENST00000565575 961 ntBASIC13.76□□□□□ -0.21
BEST4Q8NFU0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 MTDHP4-201ENST00000600287 670 ntBASIC13.76□□□□□ -0.21
BEST4Q8NFU0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 FGD5P1-202ENST00000614866 2498 ntBASIC13.76□□□□□ -0.21
BEST4Q8NFU0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BEST4Q8NFU0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 AC008677.1-201ENST00000519230 1561 ntBASIC13.75□□□□□ -0.21
BEST4Q8NFU0 AC126335.2-201ENST00000623362 4637 ntBASIC13.75□□□□□ -0.21
BEST4Q8NFU0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BEST4Q8NFU0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms