Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 SAPCD2P3-201ENST00000455031 850 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 RPS15P9-201ENST00000494093 319 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 LINC01711-201ENST00000598340 967 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AC020765.3-201ENST00000613051 740 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AC067750.1-201ENST00000608826 6545 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.47■□□□□ 0.07
HIPK4Q8NE63 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 PRELID1P1-202ENST00000567272 903 ntBASIC15.47■□□□□ 0.07
HIPK4Q8NE63 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 AC005912.2-201ENST00000619492 2400 ntBASIC15.47■□□□□ 0.07
HIPK4Q8NE63 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 AC105250.1-201ENST00000509378 2057 ntBASIC15.47■□□□□ 0.07
HIPK4Q8NE63 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIPK4Q8NE63 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 AKR1C7P-201ENST00000305623 895 ntBASIC15.46■□□□□ 0.07
HIPK4Q8NE63 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 KRT18P27-201ENST00000427733 1299 ntBASIC15.46■□□□□ 0.07
HIPK4Q8NE63 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms