Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIML2Q8N7C3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC136621.1-201ENST00000624017 2304 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AL109954.1-202ENST00000564051 2148 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC092919.2-201ENST00000623631 1645 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC079781.3-201ENST00000449110 356 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC096734.2-201ENST00000562054 433 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AL365330.1-201ENST00000607459 531 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC007064.4-201ENST00000637740 555 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 AC138969.2-201ENST00000532739 9932 ntBASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIML2Q8N7C3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIML2Q8N7C3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms