Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ARHGEF39Q8N4T4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AC127383.1-201ENST00000444697 1800 ntBASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 MYCLP2-201ENST00000449268 967 ntBASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 FAM86LP-201ENST00000478302 853 ntBASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AC092552.1-201ENST00000547243 906 ntBASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AC036164.1-201ENST00000570544 333 ntBASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 AC009090.5-201ENST00000624886 2285 ntBASIC14.85□□□□□ -0.03
ARHGEF39Q8N4T4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 AC007950.2-201ENST00000615045 2347 ntBASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 AC005225.4-201ENST00000557330 545 ntBASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 AC105250.1-201ENST00000509378 2057 ntBASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ARHGEF39Q8N4T4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ARHGEF39Q8N4T4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ARHGEF39Q8N4T4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ARHGEF39Q8N4T4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
ARHGEF39Q8N4T4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ARHGEF39Q8N4T4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ARHGEF39Q8N4T4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms