Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 AC009093.2-202ENST00000620513 2079 ntBASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 NME4-203ENST00000397722 1232 ntTSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AC053503.3-201ENST00000448375 114 ntBASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AC026470.1-201ENST00000478038 846 ntBASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AP005212.2-201ENST00000584979 510 ntBASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 AP000974.1-201ENST00000623909 2387 ntBASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 KRT18P9-201ENST00000604826 1300 ntBASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LTBP4Q8N2S1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 MBP-201ENST00000354542 575 ntTSL 2 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 RN7SL494P-201ENST00000461517 304 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AC084262.1-201ENST00000567818 751 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AC018892.3-201ENST00000623986 2499 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 FKBP4P6-201ENST00000457486 1332 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 TSPY25P-201ENST00000429463 745 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AC004066.1-201ENST00000502488 802 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 MT3-203ENST00000565838 421 ntTSL 3 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AC018846.1-201ENST00000568231 183 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 MBP-238ENST00000580402 915 ntTSL 5 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 MIR4313-201ENST00000580760 101 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 AC090510.3-201ENST00000615831 821 ntBASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LTBP4Q8N2S1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 AC136759.1-202ENST00000530858 2194 ntBASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 KRT17P5-201ENST00000332088 839 ntBASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 RPSAP15-201ENST00000448168 861 ntBASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 DPY19L2P5-201ENST00000456300 331 ntBASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 AC023906.1-201ENST00000486386 453 ntBASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 DUX4L47-201ENST00000566374 394 ntBASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LTBP4Q8N2S1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LTBP4Q8N2S1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms