Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 ZNF890P-202ENST00000530367 1156 ntBASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 KRT8P37-201ENST00000451609 1420 ntBASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM48Q8IWZ4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AC092364.2-201ENST00000596710 2692 ntBASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PIN1P1-201ENST00000412108 996 ntBASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AC104794.3-201ENST00000566840 1248 ntBASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AC027307.3-201ENST00000594262 1100 ntBASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AL109936.8-201ENST00000641772 604 ntBASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AL662844.4-201ENST00000606367 2838 ntBASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM48Q8IWZ4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM48Q8IWZ4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM48Q8IWZ4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TRIM48Q8IWZ4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.58■□□□□ 0.09
TRIM48Q8IWZ4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
TRIM48Q8IWZ4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.58■□□□□ 0.09
TRIM48Q8IWZ4 AL136379.1-201ENST00000623471 2642 ntBASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM48Q8IWZ4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms