Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 RNA5SP486-201ENST00000515961 83 ntBASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 AL022328.3-201ENST00000607943 679 ntBASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPAS4Q8IUM7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPAS4Q8IUM7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.77■□□□□ 0.28
NPAS4Q8IUM7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms