Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 AC024681.1-201ENST00000521917 487 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 PPY2P-201ENST00000582808 702 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 LINC01144-201ENST00000626198 1710 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 AC006449.6-201ENST00000612330 2296 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13CQ709C8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13CQ709C8 KRT18P66-201ENST00000452970 1269 ntBASIC12.91□□□□□ -0.34
VPS13CQ709C8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 RN7SL736P-201ENST00000613111 269 ntBASIC12.9□□□□□ -0.34
VPS13CQ709C8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AL354877.1-201ENST00000424412 413 ntBASIC12.9□□□□□ -0.34
VPS13CQ709C8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13CQ709C8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13CQ709C8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VPS13CQ709C8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VPS13CQ709C8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
VPS13CQ709C8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VPS13CQ709C8 AC114501.1-201ENST00000445949 172 ntBASIC12.9□□□□□ -0.35
VPS13CQ709C8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
VPS13CQ709C8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
VPS13CQ709C8 AP002490.2-201ENST00000524791 560 ntBASIC12.9□□□□□ -0.35
VPS13CQ709C8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.9□□□□□ -0.35
VPS13CQ709C8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.9□□□□□ -0.35
VPS13CQ709C8 PRSS30P-206ENST00000641773 873 ntBASIC12.9□□□□□ -0.35
VPS13CQ709C8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.9□□□□□ -0.35
VPS13CQ709C8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 PCDHB19P-201ENST00000570871 2371 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms