Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 AC007686.3-201ENST00000619017 3487 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 AL020989.1-201ENST00000422979 469 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 RPS2P1-201ENST00000434010 821 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 HNRNPDP1-201ENST00000439535 754 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 SIGLEC30P-201ENST00000455569 941 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 IGHV3-22-201ENST00000520721 359 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 SLC25A1P1-201ENST00000528351 927 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 NKAPP1-205ENST00000585790 367 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 AL671883.3-201ENST00000603274 991 ntBASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
C11orf88Q6PI97 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 REXO1L8P-201ENST00000604378 1897 ntBASIC13.91□□□□□ -0.18
C11orf88Q6PI97 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 AL359258.3-201ENST00000622910 2331 ntBASIC13.91□□□□□ -0.18
C11orf88Q6PI97 AC136621.1-201ENST00000624017 2304 ntBASIC13.91□□□□□ -0.18
C11orf88Q6PI97 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms