Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF20Q5VTR2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 CETN4P-206ENST00000642099 2168 ntBASIC18.91■□□□□ 0.62
RNF20Q5VTR2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TSEN15P1-201ENST00000423257 515 ntBASIC18.91■□□□□ 0.62
RNF20Q5VTR2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 AL079307.3-201ENST00000556114 283 ntBASIC18.91■□□□□ 0.62
RNF20Q5VTR2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 PPT1-215ENST00000641471 2368 ntBASIC18.91■□□□□ 0.62
RNF20Q5VTR2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
RNF20Q5VTR2 AC127383.1-201ENST00000444697 1800 ntBASIC18.9■□□□□ 0.62
RNF20Q5VTR2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.9■□□□□ 0.62
RNF20Q5VTR2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AL589739.1-201ENST00000607720 493 ntBASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AL691403.2-201ENST00000618460 490 ntBASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AC023511.2-201ENST00000618803 211 ntBASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF20Q5VTR2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF20Q5VTR2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF20Q5VTR2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms