Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HLA-K-203ENST00000430151 1046 ntBASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AC114812.1-204ENST00000449669 728 ntBASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 LINC02199-201ENST00000506655 2702 ntBASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 MIR769-201ENST00000390225 118 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 FTLP10-202ENST00000505798 471 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 KRT8P14-201ENST00000414254 1442 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AC132938.4-201ENST00000623835 848 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AC103988.2-201ENST00000561804 725 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 ZACNP1-201ENST00000612259 710 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AP000346.4-201ENST00000614827 381 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 MTHFR-217ENST00000641820 1569 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 AL157414.3-201ENST00000624276 1954 ntBASIC10.36□□□□□ -0.75
VPS13DQ5THJ4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AC018635.2-201ENST00000608625 364 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 CAP2P1-201ENST00000557743 1390 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms