Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
HMGCS1Q01581 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCS1Q01581 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 ELL2P1-201ENST00000413990 1906 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 AC127383.1-201ENST00000444697 1800 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 KRT18P13-201ENST00000400056 1290 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 UPF3AP3-201ENST00000420996 769 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 CEND1P1-201ENST00000451006 455 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 RARRES2P9-201ENST00000565168 469 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 AC010327.4-202ENST00000591484 748 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 AL450472.2-201ENST00000603663 1156 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 AC084121.4-201ENST00000641598 221 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 AF228730.8-201ENST00000642140 221 ntBASIC15.29■□□□□ 0.04
HMGCS1Q01581 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HMGCS1Q01581 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMGCS1Q01581 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 AC091951.1-201ENST00000512854 2465 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 PKD1P5-201ENST00000532415 10291 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 RPSAP43-201ENST00000402237 625 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 AC112482.1-201ENST00000492080 688 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 AC022145.2-201ENST00000598203 171 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 AC105339.1-204ENST00000636249 355 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCS1Q01581 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCS1Q01581 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.28■□□□□ 0.04
HMGCS1Q01581 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms