Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.11■□□□□ 0.33
TFAMQ00059 TERF1P3-201ENST00000505638 1227 ntBASIC17.11■□□□□ 0.33
TFAMQ00059 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
TFAMQ00059 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.11■□□□□ 0.33
TFAMQ00059 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.11■□□□□ 0.33
TFAMQ00059 TIMM17BP1-201ENST00000545713 516 ntBASIC17.11■□□□□ 0.33
TFAMQ00059 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
TFAMQ00059 MIR3197-201ENST00000582241 73 ntBASIC17.11■□□□□ 0.33
TFAMQ00059 AC004233.3-201ENST00000607794 1269 ntBASIC17.11■□□□□ 0.33
TFAMQ00059 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TFAMQ00059 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 HYMAI-201ENST00000635591 3347 ntBASIC17.11■□□□□ 0.33
TFAMQ00059 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TFAMQ00059 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.11■□□□□ 0.33
TFAMQ00059 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TFAMQ00059 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TFAMQ00059 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
TFAMQ00059 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TFAMQ00059 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.11■□□□□ 0.33
TFAMQ00059 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.1■□□□□ 0.33
TFAMQ00059 PAUPAR-201ENST00000630360 2965 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.1■□□□□ 0.33
TFAMQ00059 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 AP005117.1-202ENST00000581724 1908 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
TFAMQ00059 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 SPDYE19P-201ENST00000338590 713 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TFAMQ00059 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 SPTLC1P1-201ENST00000447199 261 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.1■□□□□ 0.33
TFAMQ00059 AL589987.1-201ENST00000453380 819 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 DOC2GP-202ENST00000514950 1163 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 SRD5A3P1-201ENST00000603021 949 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 AC004790.1-201ENST00000612686 536 ntBASIC17.1■□□□□ 0.33
TFAMQ00059 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.1■□□□□ 0.33
TFAMQ00059 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.1■□□□□ 0.33
TFAMQ00059 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TFAMQ00059 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.1■□□□□ 0.33
TFAMQ00059 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.1■□□□□ 0.33
TFAMQ00059 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TFAMQ00059 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.09■□□□□ 0.33
TFAMQ00059 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.09■□□□□ 0.33
TFAMQ00059 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.09■□□□□ 0.33
TFAMQ00059 KRT18P64-201ENST00000434946 1219 ntBASIC17.09■□□□□ 0.33
TFAMQ00059 RPL13P2-201ENST00000440687 659 ntBASIC17.09■□□□□ 0.33
TFAMQ00059 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.09■□□□□ 0.33
TFAMQ00059 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.09■□□□□ 0.33
TFAMQ00059 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.09■□□□□ 0.33
TFAMQ00059 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.09■□□□□ 0.33
TFAMQ00059 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.09■□□□□ 0.33
TFAMQ00059 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TFAMQ00059 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms