Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.19■□□□□ 0.02
VSX2P58304 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.19■□□□□ 0.02
VSX2P58304 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.19■□□□□ 0.02
VSX2P58304 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.19■□□□□ 0.02
VSX2P58304 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.19■□□□□ 0.02
VSX2P58304 AC104794.3-201ENST00000566840 1248 ntBASIC15.19■□□□□ 0.02
VSX2P58304 AC138761.1-201ENST00000584393 385 ntBASIC15.19■□□□□ 0.02
VSX2P58304 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 LINC02084-201ENST00000606069 1096 ntBASIC15.19■□□□□ 0.02
VSX2P58304 AC004461.2-201ENST00000629517 803 ntBASIC15.19■□□□□ 0.02
VSX2P58304 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VSX2P58304 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.19■□□□□ 0.02
VSX2P58304 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VSX2P58304 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.18■□□□□ 0.02
VSX2P58304 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 AC011477.6-201ENST00000604980 1927 ntBASIC15.18■□□□□ 0.02
VSX2P58304 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.18■□□□□ 0.02
VSX2P58304 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
VSX2P58304 AC114501.2-201ENST00000439631 535 ntBASIC15.18■□□□□ 0.02
VSX2P58304 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.18■□□□□ 0.02
VSX2P58304 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.18■□□□□ 0.02
VSX2P58304 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.18■□□□□ 0.02
VSX2P58304 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 SPDYE18-201ENST00000510091 1050 ntBASIC15.18■□□□□ 0.02
VSX2P58304 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.18■□□□□ 0.02
VSX2P58304 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.18■□□□□ 0.02
VSX2P58304 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.18■□□□□ 0.02
VSX2P58304 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.18■□□□□ 0.02
VSX2P58304 AC004233.3-201ENST00000607794 1269 ntBASIC15.18■□□□□ 0.02
VSX2P58304 AC074044.1-201ENST00000609673 707 ntBASIC15.18■□□□□ 0.02
VSX2P58304 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
VSX2P58304 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.18■□□□□ 0.02
VSX2P58304 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VSX2P58304 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 AC010491.1-201ENST00000563101 2797 ntBASIC15.18■□□□□ 0.02
VSX2P58304 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.18■□□□□ 0.02
VSX2P58304 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VSX2P58304 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.17■□□□□ 0.02
VSX2P58304 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VSX2P58304 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.17■□□□□ 0.02
VSX2P58304 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.17■□□□□ 0.02
VSX2P58304 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 AL603832.2-201ENST00000566195 2125 ntBASIC15.17■□□□□ 0.02
VSX2P58304 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.17■□□□□ 0.02
VSX2P58304 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.17■□□□□ 0.02
VSX2P58304 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.17■□□□□ 0.02
VSX2P58304 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.17■□□□□ 0.02
VSX2P58304 GNAQP1-201ENST00000444815 1067 ntBASIC15.17■□□□□ 0.02
VSX2P58304 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.17■□□□□ 0.02
VSX2P58304 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.17■□□□□ 0.02
VSX2P58304 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.17■□□□□ 0.02
VSX2P58304 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.17■□□□□ 0.02
VSX2P58304 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms