Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE1AP54750 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE1AP54750 AC023157.3-201ENST00000619086 2088 ntBASIC19.28■□□□□ 0.68
PDE1AP54750 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PDE1AP54750 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.28■□□□□ 0.68
PDE1AP54750 RPL13P2-201ENST00000440687 659 ntBASIC19.28■□□□□ 0.68
PDE1AP54750 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE1AP54750 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PDE1AP54750 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE1AP54750 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE1AP54750 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE1AP54750 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE1AP54750 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE1AP54750 AL590560.3-201ENST00000623350 461 ntBASIC19.28■□□□□ 0.68
PDE1AP54750 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE1AP54750 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE1AP54750 AF228730.6-201ENST00000641497 218 ntBASIC19.28■□□□□ 0.68
PDE1AP54750 AC084121.3-201ENST00000641716 218 ntBASIC19.28■□□□□ 0.68
PDE1AP54750 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE1AP54750 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDE1AP54750 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDE1AP54750 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE1AP54750 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDE1AP54750 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE1AP54750 AC087499.5-201ENST00000452760 1342 ntBASIC19.27■□□□□ 0.68
PDE1AP54750 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PDE1AP54750 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDE1AP54750 AC100757.3-201ENST00000622361 1406 ntBASIC19.27■□□□□ 0.68
PDE1AP54750 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
PDE1AP54750 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE1AP54750 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDE1AP54750 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDE1AP54750 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDE1AP54750 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 TSSK5P-201ENST00000423978 907 ntBASIC19.27■□□□□ 0.68
PDE1AP54750 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE1AP54750 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 RN7SL618P-201ENST00000477850 296 ntBASIC19.27■□□□□ 0.68
PDE1AP54750 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE1AP54750 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE1AP54750 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.27■□□□□ 0.68
PDE1AP54750 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 LINC01115-203ENST00000606068 577 ntBASIC19.27■□□□□ 0.68
PDE1AP54750 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE1AP54750 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE1AP54750 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDE1AP54750 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
PDE1AP54750 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDE1AP54750 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDE1AP54750 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDE1AP54750 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDE1AP54750 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.27■□□□□ 0.67
PDE1AP54750 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.27■□□□□ 0.67
PDE1AP54750 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PDE1AP54750 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PDE1AP54750 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDE1AP54750 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE1AP54750 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE1AP54750 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE1AP54750 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE1AP54750 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 MIR943-201ENST00000401286 94 ntBASIC19.26■□□□□ 0.67
PDE1AP54750 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE1AP54750 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.26■□□□□ 0.67
PDE1AP54750 SLED1-202ENST00000512051 380 ntBASIC19.26■□□□□ 0.67
PDE1AP54750 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms