Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.44□□□□□ -0.1
HMGA2P52926 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.44□□□□□ -0.1
HMGA2P52926 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
HMGA2P52926 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HMGA2P52926 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGA2P52926 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 TFAMP1-201ENST00000412727 736 ntBASIC14.43□□□□□ -0.1
HMGA2P52926 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.43□□□□□ -0.1
HMGA2P52926 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HMGA2P52926 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 AL662844.1-201ENST00000546340 181 ntBASIC14.43□□□□□ -0.1
HMGA2P52926 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.43□□□□□ -0.1
HMGA2P52926 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGA2P52926 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGA2P52926 AC026979.3-201ENST00000607315 403 ntBASIC14.43□□□□□ -0.1
HMGA2P52926 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMGA2P52926 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGA2P52926 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms