Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCNKBP51801 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCNKBP51801 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCNKBP51801 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.8■□□□□ 0.28
CLCNKBP51801 ACTG1P3-201ENST00000431775 1114 ntBASIC16.8■□□□□ 0.28
CLCNKBP51801 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 AC007274.1-201ENST00000439805 662 ntBASIC16.8■□□□□ 0.28
CLCNKBP51801 CROCCP4-201ENST00000457096 498 ntBASIC16.8■□□□□ 0.28
CLCNKBP51801 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 TDH-203ENST00000531764 1110 ntBASIC16.8■□□□□ 0.28
CLCNKBP51801 ENPP7P5-201ENST00000541031 1031 ntBASIC16.8■□□□□ 0.28
CLCNKBP51801 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCNKBP51801 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCNKBP51801 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 BTNL10-201ENST00000595971 695 ntBASIC16.8■□□□□ 0.28
CLCNKBP51801 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLCNKBP51801 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.8■□□□□ 0.28
CLCNKBP51801 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCNKBP51801 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCNKBP51801 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCNKBP51801 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCNKBP51801 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCNKBP51801 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCNKBP51801 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCNKBP51801 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLCNKBP51801 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCNKBP51801 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCNKBP51801 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCNKBP51801 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCNKBP51801 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCNKBP51801 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCNKBP51801 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCNKBP51801 SLC25A47P1-201ENST00000531577 414 ntBASIC16.79■□□□□ 0.28
CLCNKBP51801 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCNKBP51801 AC015910.1-201ENST00000579400 975 ntBASIC16.79■□□□□ 0.28
CLCNKBP51801 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCNKBP51801 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCNKBP51801 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCNKBP51801 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLCNKBP51801 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCNKBP51801 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLCNKBP51801 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCNKBP51801 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCNKBP51801 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 AC018665.1-201ENST00000622927 1362 ntBASIC16.78■□□□□ 0.28
CLCNKBP51801 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCNKBP51801 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCNKBP51801 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CLCNKBP51801 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCNKBP51801 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCNKBP51801 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCNKBP51801 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms