Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN3P51790 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN3P51790 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLCN3P51790 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN3P51790 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLCN3P51790 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN3P51790 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 C1QBPP1-201ENST00000400117 770 ntBASIC17.3■□□□□ 0.36
CLCN3P51790 MIR1909-201ENST00000411312 80 ntBASIC17.3■□□□□ 0.36
CLCN3P51790 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN3P51790 RPL13AP25-201ENST00000484130 612 ntBASIC17.3■□□□□ 0.36
CLCN3P51790 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN3P51790 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN3P51790 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.3■□□□□ 0.36
CLCN3P51790 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLCN3P51790 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN3P51790 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CLCN3P51790 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN3P51790 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN3P51790 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLCN3P51790 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN3P51790 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN3P51790 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLCN3P51790 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN3P51790 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CLCN3P51790 SOCS2P1-201ENST00000417727 557 ntBASIC17.29■□□□□ 0.36
CLCN3P51790 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.29■□□□□ 0.36
CLCN3P51790 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
CLCN3P51790 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN3P51790 TDH-203ENST00000531764 1110 ntBASIC17.29■□□□□ 0.36
CLCN3P51790 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.29■□□□□ 0.36
CLCN3P51790 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN3P51790 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN3P51790 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN3P51790 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN3P51790 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCN3P51790 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN3P51790 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN3P51790 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN3P51790 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN3P51790 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN3P51790 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN3P51790 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN3P51790 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN3P51790 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN3P51790 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN3P51790 MIR658-201ENST00000385210 100 ntBASIC17.28■□□□□ 0.36
CLCN3P51790 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN3P51790 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN3P51790 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CLCN3P51790 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN3P51790 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN3P51790 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN3P51790 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN3P51790 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN3P51790 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN3P51790 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN3P51790 BTNL10-201ENST00000595971 695 ntBASIC17.28■□□□□ 0.36
CLCN3P51790 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCN3P51790 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms