Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 CICP13-201ENST00000422015 2789 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC100757.3-201ENST00000622361 1406 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.32□□□□□ -0.12
APOBEC1P41238 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.31□□□□□ -0.12
APOBEC1P41238 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
APOBEC1P41238 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.31□□□□□ -0.12
APOBEC1P41238 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
APOBEC1P41238 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
APOBEC1P41238 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.31□□□□□ -0.12
APOBEC1P41238 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.31□□□□□ -0.12
APOBEC1P41238 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 AL512361.1-201ENST00000554200 418 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 AC010336.2-201ENST00000564226 506 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.31□□□□□ -0.12
APOBEC1P41238 AC025048.3-201ENST00000590609 569 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 AC093512.1-201ENST00000617969 520 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 AC005702.4-201ENST00000618393 416 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.31□□□□□ -0.12
APOBEC1P41238 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.31□□□□□ -0.12
APOBEC1P41238 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
APOBEC1P41238 AC020658.6-201ENST00000623564 1870 ntBASIC14.31□□□□□ -0.12
APOBEC1P41238 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOBEC1P41238 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOBEC1P41238 AC063926.3-201ENST00000624734 5658 ntBASIC14.3□□□□□ -0.12
APOBEC1P41238 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOBEC1P41238 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOBEC1P41238 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.3□□□□□ -0.12
APOBEC1P41238 RFPL4AP1-201ENST00000530883 850 ntBASIC14.3□□□□□ -0.12
APOBEC1P41238 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC074044.1-201ENST00000609673 707 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms