Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNCAP37840 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.11□□□□□ -0.31
SNCAP37840 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 U82695.1-201ENST00000635752 1889 ntBASIC13.11□□□□□ -0.31
SNCAP37840 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.11□□□□□ -0.31
SNCAP37840 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.11□□□□□ -0.31
SNCAP37840 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 MIR1224-201ENST00000408193 85 ntBASIC13.11□□□□□ -0.31
SNCAP37840 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.11□□□□□ -0.31
SNCAP37840 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
SNCAP37840 AC008667.4-201ENST00000607370 168 ntBASIC13.11□□□□□ -0.31
SNCAP37840 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 AC005593.1-201ENST00000624894 515 ntBASIC13.11□□□□□ -0.31
SNCAP37840 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.11□□□□□ -0.31
SNCAP37840 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.11□□□□□ -0.31
SNCAP37840 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.11□□□□□ -0.31
SNCAP37840 AC015656.1-201ENST00000624209 3578 ntBASIC13.11□□□□□ -0.31
SNCAP37840 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNCAP37840 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.11□□□□□ -0.31
SNCAP37840 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCAP37840 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 AC005622.1-201ENST00000636801 1703 ntBASIC13.1□□□□□ -0.31
SNCAP37840 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCAP37840 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SNCAP37840 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.1□□□□□ -0.31
SNCAP37840 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 AP003680.1-201ENST00000598970 3660 ntBASIC13.1□□□□□ -0.31
SNCAP37840 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 RPS2P28-201ENST00000314255 741 ntBASIC13.1□□□□□ -0.31
SNCAP37840 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SNCAP37840 MRPL20P1-201ENST00000400819 433 ntBASIC13.1□□□□□ -0.31
SNCAP37840 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.1□□□□□ -0.31
SNCAP37840 RPS2P1-201ENST00000434010 821 ntBASIC13.1□□□□□ -0.31
SNCAP37840 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.1□□□□□ -0.31
SNCAP37840 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.1□□□□□ -0.31
SNCAP37840 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCAP37840 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCAP37840 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.1□□□□□ -0.31
SNCAP37840 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.1□□□□□ -0.31
SNCAP37840 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.1□□□□□ -0.31
SNCAP37840 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.1□□□□□ -0.31
SNCAP37840 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SNCAP37840 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SNCAP37840 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNCAP37840 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms