Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SNHG9-202ENST00000564014 471 ntBASIC15.15■□□□□ 0.02
KRT20P35900 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT20P35900 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT20P35900 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT20P35900 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
KRT20P35900 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 UXT-AS1-201ENST00000590504 1525 ntBASIC15.15■□□□□ 0.02
KRT20P35900 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KRT20P35900 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 AC023157.3-201ENST00000619086 2088 ntBASIC15.15■□□□□ 0.02
KRT20P35900 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
KRT20P35900 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT20P35900 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
KRT20P35900 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT20P35900 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT20P35900 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT20P35900 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.14■□□□□ 0.01
KRT20P35900 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KRT20P35900 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT20P35900 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 ADH5P3-201ENST00000433842 1137 ntBASIC15.14■□□□□ 0.01
KRT20P35900 KRT8P48-201ENST00000515599 1220 ntBASIC15.14■□□□□ 0.01
KRT20P35900 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT20P35900 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KRT20P35900 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT20P35900 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT20P35900 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT20P35900 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT20P35900 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT20P35900 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.13■□□□□ 0.01
KRT20P35900 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
KRT20P35900 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 AC004967.1-201ENST00000453589 447 ntBASIC15.13■□□□□ 0.01
KRT20P35900 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 AC243562.1-201ENST00000560672 389 ntBASIC15.13■□□□□ 0.01
KRT20P35900 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 AC004835.2-201ENST00000603762 682 ntBASIC15.13■□□□□ 0.01
KRT20P35900 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms