Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC087386.2-201ENST00000623212 4637 ntBASIC14.11□□□□□ -0.15
CD40LGP29965 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD40LGP29965 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40LGP29965 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CD40LGP29965 HAUS4P1-201ENST00000406739 1145 ntBASIC14.11□□□□□ -0.15
CD40LGP29965 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40LGP29965 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 AC011840.4-201ENST00000578471 627 ntBASIC14.11□□□□□ -0.15
CD40LGP29965 MPDU1-223ENST00000582151 728 ntBASIC14.11□□□□□ -0.15
CD40LGP29965 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.11□□□□□ -0.15
CD40LGP29965 AL390719.2-201ENST00000606993 987 ntBASIC14.11□□□□□ -0.15
CD40LGP29965 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.11□□□□□ -0.15
CD40LGP29965 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CD40LGP29965 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40LGP29965 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD40LGP29965 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CD40LGP29965 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40LGP29965 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CD40LGP29965 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.1□□□□□ -0.15
CD40LGP29965 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.1□□□□□ -0.15
CD40LGP29965 AC089987.1-201ENST00000551654 2209 ntBASIC14.1□□□□□ -0.15
CD40LGP29965 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.1□□□□□ -0.15
CD40LGP29965 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.1□□□□□ -0.15
CD40LGP29965 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 AC069148.1-201ENST00000608741 768 ntBASIC14.1□□□□□ -0.15
CD40LGP29965 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.1□□□□□ -0.15
CD40LGP29965 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CD40LGP29965 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 AL353732.1-201ENST00000569618 1459 ntBASIC14.1□□□□□ -0.15
CD40LGP29965 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.1□□□□□ -0.15
CD40LGP29965 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CD40LGP29965 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 U82695.1-201ENST00000635752 1889 ntBASIC14.1□□□□□ -0.15
CD40LGP29965 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CD40LGP29965 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms