Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.5■□□□□ 0.39
CTGFP29279 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CTGFP29279 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTGFP29279 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CTGFP29279 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.49■□□□□ 0.39
CTGFP29279 AC114501.1-201ENST00000445949 172 ntBASIC17.49■□□□□ 0.39
CTGFP29279 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.49■□□□□ 0.39
CTGFP29279 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.49■□□□□ 0.39
CTGFP29279 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CTGFP29279 AL161670.2-201ENST00000557650 1227 ntBASIC17.49■□□□□ 0.39
CTGFP29279 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.49■□□□□ 0.39
CTGFP29279 AC103988.2-201ENST00000561804 725 ntBASIC17.49■□□□□ 0.39
CTGFP29279 AC013355.1-201ENST00000562625 723 ntBASIC17.49■□□□□ 0.39
CTGFP29279 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.49■□□□□ 0.39
CTGFP29279 BNIP3P13-201ENST00000599968 566 ntBASIC17.49■□□□□ 0.39
CTGFP29279 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.49■□□□□ 0.39
CTGFP29279 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.49■□□□□ 0.39
CTGFP29279 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 KRT8P29-201ENST00000420409 1371 ntBASIC17.49■□□□□ 0.39
CTGFP29279 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.49■□□□□ 0.39
CTGFP29279 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTGFP29279 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 KRT8P14-201ENST00000414254 1442 ntBASIC17.48■□□□□ 0.39
CTGFP29279 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 AL158070.2-201ENST00000623713 1621 ntBASIC17.48■□□□□ 0.39
CTGFP29279 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.48■□□□□ 0.39
CTGFP29279 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.48■□□□□ 0.39
CTGFP29279 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.48■□□□□ 0.39
CTGFP29279 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.48■□□□□ 0.39
CTGFP29279 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.48■□□□□ 0.39
CTGFP29279 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.48■□□□□ 0.39
CTGFP29279 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.48■□□□□ 0.39
CTGFP29279 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.48■□□□□ 0.39
CTGFP29279 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.48■□□□□ 0.39
CTGFP29279 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.48■□□□□ 0.39
CTGFP29279 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.48■□□□□ 0.39
CTGFP29279 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.48■□□□□ 0.39
CTGFP29279 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 AC007787.1-201ENST00000588095 1583 ntBASIC17.48■□□□□ 0.39
CTGFP29279 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CTGFP29279 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
CTGFP29279 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTGFP29279 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTGFP29279 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CTGFP29279 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTGFP29279 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CTGFP29279 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.47■□□□□ 0.39
CTGFP29279 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CTGFP29279 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CTGFP29279 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.47■□□□□ 0.39
CTGFP29279 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 CEP164P1-201ENST00000455142 418 ntBASIC17.47■□□□□ 0.39
CTGFP29279 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.47■□□□□ 0.39
CTGFP29279 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTGFP29279 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.47■□□□□ 0.39
CTGFP29279 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms