Protein–RNA interactions for Protein: P25105

PTAFR, Platelet-activating factor receptor, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFRP25105 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PTAFRP25105 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.05□□□□□ -0.16
PTAFRP25105 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.05□□□□□ -0.16
PTAFRP25105 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.05□□□□□ -0.16
PTAFRP25105 AL139010.1-201ENST00000454878 894 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 TERF1P3-201ENST00000505638 1227 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.05□□□□□ -0.16
PTAFRP25105 AL079307.3-201ENST00000556114 283 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.05□□□□□ -0.16
PTAFRP25105 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.05□□□□□ -0.16
PTAFRP25105 AL133215.2-201ENST00000609242 977 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 TEX28P1-201ENST00000613479 1221 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 TEX28P2-201ENST00000617764 1221 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.05□□□□□ -0.16
PTAFRP25105 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.05□□□□□ -0.16
PTAFRP25105 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 AC087499.5-201ENST00000452760 1342 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.05□□□□□ -0.16
PTAFRP25105 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.05□□□□□ -0.16
PTAFRP25105 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 AC022144.1-201ENST00000602255 1580 ntBASIC14.05□□□□□ -0.16
PTAFRP25105 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTAFRP25105 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PTAFRP25105 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.04□□□□□ -0.16
PTAFRP25105 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.04□□□□□ -0.16
PTAFRP25105 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.04□□□□□ -0.16
PTAFRP25105 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PTAFRP25105 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 RPL37AP1-201ENST00000412502 279 ntBASIC14.04□□□□□ -0.16
PTAFRP25105 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.04□□□□□ -0.16
PTAFRP25105 SERBP1P3-201ENST00000459980 809 ntBASIC14.04□□□□□ -0.16
PTAFRP25105 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.04□□□□□ -0.16
PTAFRP25105 BANF1P1-201ENST00000553684 263 ntBASIC14.04□□□□□ -0.16
PTAFRP25105 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.04□□□□□ -0.16
PTAFRP25105 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.04□□□□□ -0.16
PTAFRP25105 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.04□□□□□ -0.16
PTAFRP25105 AC138761.1-201ENST00000584393 385 ntBASIC14.04□□□□□ -0.16
PTAFRP25105 MIR4321-201ENST00000592276 80 ntBASIC14.04□□□□□ -0.16
PTAFRP25105 AC009118.2-201ENST00000613275 655 ntBASIC14.04□□□□□ -0.16
PTAFRP25105 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.04□□□□□ -0.16
PTAFRP25105 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 AC126177.1-201ENST00000547829 2218 ntBASIC14.04□□□□□ -0.16
PTAFRP25105 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.04□□□□□ -0.16
PTAFRP25105 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.04□□□□□ -0.16
PTAFRP25105 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTAFRP25105 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms