Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.08□□□□□ -0.32
CCL3L1P16619 MIR4313-201ENST00000580760 101 ntBASIC13.08□□□□□ -0.32
CCL3L1P16619 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL3L1P16619 AL844908.2-201ENST00000609461 460 ntBASIC13.08□□□□□ -0.32
CCL3L1P16619 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.08□□□□□ -0.32
CCL3L1P16619 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL3L1P16619 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCL3L1P16619 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CCL3L1P16619 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
CCL3L1P16619 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL3L1P16619 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL3L1P16619 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 AC092850.2-201ENST00000623821 2697 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL3L1P16619 AL607033.1-201ENST00000623900 1599 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 MIR770-201ENST00000390219 98 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL3L1P16619 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL3L1P16619 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL3L1P16619 AL512638.1-201ENST00000457493 794 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.07□□□□□ -0.32
CCL3L1P16619 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL3L1P16619 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL3L1P16619 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
CCL3L1P16619 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL3L1P16619 AC044860.1-202ENST00000559481 777 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL3L1P16619 AC097359.3-201ENST00000603982 1210 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 AL109936.8-201ENST00000641772 604 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CCL3L1P16619 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL3L1P16619 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL3L1P16619 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL3L1P16619 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 TSPY26P-202ENST00000565928 3884 ntBASIC13.07□□□□□ -0.32
CCL3L1P16619 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL3L1P16619 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL3L1P16619 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.06□□□□□ -0.32
CCL3L1P16619 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL3L1P16619 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CCL3L1P16619 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL3L1P16619 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.06□□□□□ -0.32
CCL3L1P16619 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3L1P16619 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL3L1P16619 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3L1P16619 AC067930.6-201ENST00000623257 4947 ntBASIC13.06□□□□□ -0.32
CCL3L1P16619 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3L1P16619 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CCL3L1P16619 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3L1P16619 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms