Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC148477.4-201ENST00000613430 1793 ntBASIC15.03■□□□□ -0
NCK1P16333 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NCK1P16333 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCK1P16333 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NCK1P16333 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.03■□□□□ -0
NCK1P16333 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.02■□□□□ -0
NCK1P16333 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NCK1P16333 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NCK1P16333 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 AC023024.2-201ENST00000623561 1993 ntBASIC15.02■□□□□ -0
NCK1P16333 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NCK1P16333 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 FGD5P1-202ENST00000614866 2498 ntBASIC15.02■□□□□ -0
NCK1P16333 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.02■□□□□ -0
NCK1P16333 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.02■□□□□ -0
NCK1P16333 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.02■□□□□ -0
NCK1P16333 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NCK1P16333 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.02■□□□□ -0
NCK1P16333 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.02■□□□□ -0
NCK1P16333 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.02■□□□□ -0
NCK1P16333 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NCK1P16333 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NCK1P16333 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.02■□□□□ -0
NCK1P16333 MIR4313-201ENST00000580760 101 ntBASIC15.02■□□□□ -0
NCK1P16333 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NCK1P16333 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.02■□□□□ -0
NCK1P16333 TP73-AS1-207ENST00000624167 988 ntBASIC15.02■□□□□ -0
NCK1P16333 AC117500.6-201ENST00000624871 588 ntBASIC15.02■□□□□ -0
NCK1P16333 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NCK1P16333 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NCK1P16333 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NCK1P16333 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NCK1P16333 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.02□□□□□ -0.01
NCK1P16333 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NCK1P16333 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NCK1P16333 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NCK1P16333 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NCK1P16333 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NCK1P16333 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NCK1P16333 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
NCK1P16333 AC126365.1-201ENST00000578585 1514 ntBASIC15.02□□□□□ -0.01
NCK1P16333 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.02□□□□□ -0.01
NCK1P16333 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NCK1P16333 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
NCK1P16333 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
NCK1P16333 CICP4-201ENST00000447359 2812 ntBASIC15.01□□□□□ -0.01
NCK1P16333 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 AC005912.2-201ENST00000619492 2400 ntBASIC15.01□□□□□ -0.01
NCK1P16333 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 UPK3BP1-201ENST00000428678 509 ntBASIC15.01□□□□□ -0.01
NCK1P16333 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.01□□□□□ -0.01
NCK1P16333 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.01□□□□□ -0.01
NCK1P16333 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.01□□□□□ -0.01
NCK1P16333 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NCK1P16333 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.01□□□□□ -0.01
NCK1P16333 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NCK1P16333 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms