Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PDGFRAP16234 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFRAP16234 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 AC020658.6-201ENST00000623564 1870 ntBASIC16.61■□□□□ 0.25
PDGFRAP16234 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PDGFRAP16234 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFRAP16234 AC136604.1-201ENST00000418535 575 ntBASIC16.61■□□□□ 0.25
PDGFRAP16234 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 BCRP1-201ENST00000444246 691 ntBASIC16.61■□□□□ 0.25
PDGFRAP16234 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFRAP16234 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFRAP16234 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFRAP16234 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFRAP16234 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.61■□□□□ 0.25
PDGFRAP16234 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFRAP16234 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFRAP16234 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 MIR6069-201ENST00000620069 79 ntBASIC16.61■□□□□ 0.25
PDGFRAP16234 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFRAP16234 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFRAP16234 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFRAP16234 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFRAP16234 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFRAP16234 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.6■□□□□ 0.25
PDGFRAP16234 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 AL607033.1-201ENST00000623900 1599 ntBASIC16.6■□□□□ 0.25
PDGFRAP16234 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AC105250.1-201ENST00000509378 2057 ntBASIC16.6■□□□□ 0.25
PDGFRAP16234 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PDGFRAP16234 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDGFRAP16234 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 SERBP1P3-201ENST00000459980 809 ntBASIC16.6■□□□□ 0.25
PDGFRAP16234 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PDGFRAP16234 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFRAP16234 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.6■□□□□ 0.25
PDGFRAP16234 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AL033527.5-202ENST00000641632 1098 ntBASIC16.6■□□□□ 0.25
PDGFRAP16234 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
PDGFRAP16234 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFRAP16234 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDGFRAP16234 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms