Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.36■□□□□ 0.21
BRAFP15056 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
BRAFP15056 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 AC254562.1-201ENST00000417586 456 ntBASIC16.35■□□□□ 0.21
BRAFP15056 AC092474.2-201ENST00000424288 719 ntBASIC16.35■□□□□ 0.21
BRAFP15056 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.35■□□□□ 0.21
BRAFP15056 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.35■□□□□ 0.21
BRAFP15056 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.35■□□□□ 0.21
BRAFP15056 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 AL031055.1-201ENST00000606362 631 ntBASIC16.35■□□□□ 0.21
BRAFP15056 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.35■□□□□ 0.21
BRAFP15056 AC079781.4-201ENST00000641908 219 ntBASIC16.35■□□□□ 0.21
BRAFP15056 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.35■□□□□ 0.21
BRAFP15056 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.35■□□□□ 0.21
BRAFP15056 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BRAFP15056 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.35■□□□□ 0.21
BRAFP15056 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
BRAFP15056 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRAFP15056 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
BRAFP15056 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
BRAFP15056 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BRAFP15056 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 AL671277.1-201ENST00000429656 993 ntBASIC16.34■□□□□ 0.21
BRAFP15056 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.34■□□□□ 0.21
BRAFP15056 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.34■□□□□ 0.21
BRAFP15056 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRAFP15056 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.34■□□□□ 0.21
BRAFP15056 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.34■□□□□ 0.21
BRAFP15056 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BRAFP15056 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.34■□□□□ 0.21
BRAFP15056 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms